Returns the Cytoscape network as a Bioconductor graph.
createGraphFromNetwork(network = NULL, base.url = .defaultBaseUrl)
| network | (optional) Name or SUID of the network. Default is the "current" network active in Cytoscape. |
|---|---|
| base.url | (optional) Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3. |
A Bioconductor graph object.
Alexander Pico, Tanja Muetze, Georgi Kolishovski, Paul Shannon
cw <- CytoscapeWindow('network', graph=make_graphnel()) g <- createGraphFromNetwork() g <- createGraphFromNetwork('myNetwork')