Get table column values

Source: R/Tables.R

Retrieve one or more columns of data from node, edge or network tables.

getTableColumns(
  table = "node",
  columns = NULL,
  namespace = "default",
  network = NULL,
  base.url = .defaultBaseUrl
)

Arguments

table

name of table, e.g., node (default), edge, network
columns

names of columns to retrieve values from as list object or comma-separated list; default is all columns
namespace

namespace of table; default is "default"
network

(optional) Name or SUID of the network. Default is the "current" network active in Cytoscape.
base.url

(optional) Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3.

Value

A data.frame of column values

Details

The 'SUID' column is always retrieved along with specified columns. The 'SUID' values are used as row.names in the returned data.frame.

Examples

# \donttest{
getTableColumns()
getTableColumns('node','group')
# }