Cytoscape Project Statistics

Cytoscape Application

Downloads by Version Over Time (Feb 2014 - Dec 2015)

Cytoscape downloads in 2015: average 14,000 per month (470 per day)

Downloads by Version and Platform Over Time (Feb 2014 - Dec 2015)

Windows is the dominant Cytoscape platform, and in the last year, 32 bit Windows systems have dramatically decreased while 64 bit systems have dramatically increased. Also, Cytoscape 2.x has drastically decreased.

Daily Cytoscape Starts: Total 1,267,406 (2/9/2014 - 1/10/2016)

Weekday starts: 3,000 per day (worldwide)
Weekend and holiday starts: 1,000 per day (worldwide)

Web Site Visits (cytoscape.org) and Downloads (via download.php): 2012-2016

Web site visits generally increase year over year, while downloads clearly increase year over year. In September 2015, we changed how our download page works, so that the actual downloads are more accurately reported in this graph.

Web Site Sessions: Total 1,492,628 (1/1/2012 - 2/10/2016)

Viewed over a multi-year period, web page visits from US workstations are significant, but visits from the rest of the world are even more frequent. The frequency of "Other" shows that Cytoscape is used worldwide.

Prior Year: Total 481,807 (1/1/2015 - 2/10/2016)

Viewed over just the last year, web page visits show continued predominance of visits from US workstations, but also growing use throughout the world.

Web Site Referral Sources: Total 1,492,596 (1/1/2012 - 2/10/2016)

Viewed over a multi-year period, Cytoscape is most often found via Google search.

Prior Year: Total 481,807 (1/1/2015 - 2/10/2016)

Viewed over just the last year, referrals show continued predominance of US-based search engines, but also growing use of non-US search engines compared to previous years.

App Store

Top App Store Attraction by Category: Total 175,279 (6/1/2012 - 2/10/2016)

Viewed over a multi-year period, Network Generation and Data Vizualization are important functions, followed by Graph Analysis, Clustering, and Ontology Analysis.

Prior Year: Total 58,715 (1/1/2015 - 2/10/2016)

Viewed over just the last year, Network Generation and Data Vizualization remain important functions, but Network Analysis replaces Graph Analysis, and Enrichment Analysis replaces Ontology Analysis.

App Store Visits by Country: Total 335,340 (6/1/2012 - 2/10/2016)

The app store has received over 300,000 visits in 4 years worldwide.

Prior Year Total 132,656 (1/1/2015 - 2/10/2016)

Viewed over just the last year, app store visits remain robust and visits from Asia are increasing.

App Store Visits per Week: Total 335,340 (6/1/2012 - 2/10/2016)

App store visits increase year over year.

App Store Referral Sources: Total 335,340 (6/1/2012 - 2/10/2016)

Viewed over a multi-year period, apps are downloaded most often from Cytoscape or discovered via Google search.

Prior Year: Total 132,656 (1/1/2015 - 2/10/2016)

Viewed over just the last year, apps are downloaded more and more through search engines and other means.

Apps Checked into App Store

New app submissions: maintaining average of ~3 per month. The vast majority of new apps are for Cytoscape 3 -- very few new Cytoscape 2 apps are being created.

Misc. Statistics

PubMed Cytoscape Citations as of Feb. 10, 2016

According to Google Scholar, Cytoscape is cited in nearly 145 papers per month.

PubMed Cytoscape Citations as of Feb. 10, 2016

According to PubMed, Cytoscape is cited in nearly 70 papers per month.

Countries Funding Cytoscape Citations (since 2004): Total 5,433 Citations

Viewed over a multi-year period, US and UK are the top funders of papers citing Cytoscape.

Prior Year: Total 930 Citations (1/1/2015 - 2/10/2016)

Viewed over just the last year, as a percentage of the whole, US funding is declining, and UK and Canada funding is growing.

Top 12 Funding Agencies for Cytoscape Citations (since 2004): Total 5,433 Citations

Viewed over a multi-year period, numerous NIH agencies fund most papers that cite Cytoscape.

Prior Year: Total 930 Citations (1/1/2015 - 2/10/2016)

Viewed over just the last year, several NIH agencies have not funded papers that cite Cytoscape, and numerous US and non-US agencies have funded a greater share.

Top 10 Cytoscape Citations Venues (since 2004)

Viewed over a multi-year period, Cytoscape is most cited in papers published on PLoS One, followed by a number of other publishers.

Prior Year: (1/1/2015 - 2/10/2016)

Viewed over just the last year, PLoS One remains the leading Cytoscape publisher, and SciRep is gaining ground over the others.

Bugs

Google Groups Posts / Topics

Google Groups Memberships