Package org.cytoscape.view.layout

Class PartitionUtil

java.lang.Object
org.cytoscape.view.layout.PartitionUtil
public final class PartitionUtil extends Object
This class also provides static methods that are used to partition a network.

Cytoscape Backwards Compatibility (Static Class): This class is static and therefore can't be extended by users. This means that we may add methods for minor version updates. Methods will only be removed for major version updates.

Module: layout-api

To use this in your app, include the following dependency in your POM:

<dependency>
    <groupId>org.cytoscape</groupId>
    <artifactId>layout-api</artifactId>
</dependency>

  • Method Details

    • partition

      public static List<LayoutPartition> partition​(CyNetworkView networkView, boolean selectedOnly, EdgeWeighter edgeWeighter)
      Partition the graph -- this builds the LayoutEdge and LayoutNode arrays as a byproduct. The algorithm for this was taken from algorithms/graphPartition/SGraphPartition.java.
      Parameters:
      networkView - the CyNetworkView representing the graph
      selectedOnly - only consider selected nodes
      edgeWeighter - the weighter to use for edge weighting
      Returns:
      a List of LayoutPartitions

    • partition

      public static List<LayoutPartition> partition​(CyNetworkView networkView, Collection<CyNode> nodeSet, EdgeWeighter edgeWeighter)
      Partition the graph -- this builds the LayoutEdge and LayoutNode arrays as a byproduct. The algorithm for this was taken from algorithms/graphPartition/SGraphPartition.java.
      Parameters:
      networkView - the CyNetworkView representing the graph
      nodeSet - the set of nodes to consider
      edgeWeighter - the weighter to use for edge weighting
      Returns:
      a List of LayoutPartitions