| Package | Description |
|---|---|
| org.cytoscape.app |
This is the Cytoscape App API, which supports development of Cytoscape 3.X
apps in a manner similar to apps developed in Cytoscape 2.X.
|
| org.cytoscape.io.read |
Handle importing Cytoscape data (network, attributes, session, properties, etc) from files/URLs.
|
| org.cytoscape.jobs |
This package provides a mechanism for executing remote jobs from within Cytoscape.
|
| org.cytoscape.model.events |
This package contains the event interfaces necessary for communicating
with the classes in org.cytoscape.model.
|
| Modifier and Type | Method and Description |
|---|---|
CyNetworkManager |
CyAppAdapter.getCyNetworkManager()
Deprecated.
Returns an instance of
CyNetworkManager. |
| Constructor and Description |
|---|
AbstractCyNetworkReader(InputStream inputStream,
CyApplicationManager cyApplicationManager,
CyNetworkFactory cyNetworkFactory,
CyNetworkManager cyNetworkManager,
CyRootNetworkManager cyRootNetworkManager) |
AbstractCyNetworkReader(InputStream inputStream,
CyNetworkViewFactory cyNetworkViewFactory,
CyNetworkFactory cyNetworkFactory,
CyNetworkManager cyNetworkManager,
CyRootNetworkManager cyRootNetworkManager) |
| Modifier and Type | Method and Description |
|---|---|
static CyNetwork |
SUIDUtil.restoreNetwork(CyJob job,
CyNetworkManager netManager,
Long networkSUID,
boolean clear)
This method is used to restore a saved network based on the network SUID.
|
| Constructor and Description |
|---|
NetworkAboutToBeDestroyedEvent(CyNetworkManager source,
CyNetwork net)
Constructs event.
|
NetworkAddedEvent(CyNetworkManager source,
CyNetwork net)
Constructs event.
|
NetworkDestroyedEvent(CyNetworkManager source)
Constructs event.
|
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