Package | Description |
---|---|
org.cytoscape.application.swing |
This package defines the various interfaces, abstract classes, and enums
that represent the Cytoscape Swing Application API.
|
org.cytoscape.application.swing.search | |
org.cytoscape.task |
This package provides base classes for common task factory types as well as their associated task types found in Cytoscape.
|
org.cytoscape.task.create |
This package provides a variety of task factory interfaces for creating
new instances of network and other objects.
|
org.cytoscape.task.edit |
This package include a set of task factory interfaces that allow
the modification or editing of various objects within Cytoscape.
|
org.cytoscape.task.read |
This package contains a set of task factory interfaces for reading
various Cytoscape objects from files and URLs.
|
org.cytoscape.task.write |
This package contains a set of task factory interfaces used for
exporting or writing a variety of Cytoscape objects to files.
|
org.cytoscape.work |
This package defines the task framework, where tasks are units of work.
|
Constructor and Description |
---|
AbstractCyAction(Map<String,String> configProps,
CyApplicationManager applicationManager,
CyNetworkViewManager networkViewManager,
TaskFactory factory)
Creates a new AbstractCyAction object.
|
AbstractCyAction(Map<String,String> configProps,
TaskFactory predicate)
Creates a new AbstractCyAction object.
|
Modifier and Type | Interface and Description |
---|---|
interface |
NetworkSearchTaskFactory
Task Factory that has to be implemented in order to create and register a Network Search provider.
|
Modifier and Type | Class and Description |
---|---|
class |
AbstractNetworkSearchTaskFactory
This abstract implementation of
NetworkSearchTaskFactory makes the method AbstractNetworkSearchTaskFactory.getQueryComponent()
optional. |
Modifier and Type | Method and Description |
---|---|
TaskFactory |
DynamicTaskFactoryProvisioner.createFor(NetworkCollectionTaskFactory factory) |
TaskFactory |
DynamicTaskFactoryProvisioner.createFor(NetworkTaskFactory factory) |
TaskFactory |
DynamicTaskFactoryProvisioner.createFor(NetworkViewCollectionTaskFactory factory) |
TaskFactory |
DynamicTaskFactoryProvisioner.createFor(NetworkViewTaskFactory factory) |
TaskFactory |
DynamicTaskFactoryProvisioner.createFor(TableTaskFactory factory) |
Modifier and Type | Interface and Description |
---|---|
interface |
NewSessionTaskFactory
This interface provides a task iterator for creating a new session.
|
Modifier and Type | Interface and Description |
---|---|
interface |
MergeTablesTaskFactory
This interface provides a task iterator for merging two data tables.
|
Modifier and Type | Interface and Description |
---|---|
interface |
LoadMultipleNetworkFilesTaskFactory
This interface provides a task iterator for loading networks from multiple files at once.
|
interface |
LoadNetworkFileTaskFactory
This interface provides a task iterator for loading networks from a file.
|
interface |
LoadNetworkURLTaskFactory
This interface provides a task iterator for loading a URL into a network.
|
interface |
LoadTableFileTaskFactory
This interface provides a task iterator for importing the attribute file to one of network tables(Node,Edge or Network Table).
|
interface |
LoadTableURLTaskFactory
This interface provides a task iterator for importing an attribute URL to one of network tables(Node,Edge or Network Table).
|
interface |
LoadVizmapFileTaskFactory
An interface for loading styles from files.
|
interface |
OpenSessionTaskFactory
This interface provides a task iterator for loading a session.
|
Modifier and Type | Interface and Description |
---|---|
interface |
ExportSelectedNetworkTaskFactory |
interface |
ExportSelectedTableTaskFactory
This interface provides a task iterator for exporting the current
table.
|
interface |
ExportVizmapTaskFactory
This interface provides a task iterator for exporting the vizmap visual style.
|
interface |
SaveSessionAsTaskFactory
This interface provides a task iterator for saving a session in a
specified file.
|
interface |
SaveSessionTaskFactory
This interface provides a task iterator for saving a session.
|
Modifier and Type | Class and Description |
---|---|
class |
AbstractTaskFactory
A TaskFactory that is always ready to produce a TaskIterator.
|
Modifier and Type | Method and Description |
---|---|
T |
TaskManager.getConfiguration(TaskFactory factory,
Object tunableContext)
Returns a configuration object generated from the
Tunable s
read from the TaskFactory . |
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