Package org.cytoscape.io.read
Handle importing Cytoscape data (network, attributes, session, properties, etc) from files/URLs.
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Interface Summary Interface Description CyNetworkReader An extension of the Task interface that returns an array ofCyNetwork
objects that are read as part of the Task.CyNetworkReaderManager An object that registers all InputStreamReaderFactory singletons, processes specified input to determine the appropriate factory to use and then returns an instance of the correctCyNetworkReader
for the input.CyPropertyReader An extension of the Task interface that returns a property object.CyPropertyReaderManager An object that registers all InputStreamReaderFactory singletons, processes specified input to determine the appropriate factory to use and then returns an instance of the correctCyPropertyReader
for the input.CySessionReader An extension of the Task interface that returns aorg.cytoscape.property.session.Cysession
object.CySessionReaderManager An object that registers all InputStreamReaderFactory singletons, processes specified input to determine the appropriate factory to use and then returns an instance of the correctCySessionReader
for the input.CyTableReader An extension of the Task interface that returns an array ofCyTable
objects.CyTableReaderManager An object that registers all InputStreamReaderFactory singletons, processes specified input to determine the appropriate factory to use and then returns an instance of the correctCyTableReader
for the input.CyTransformerReader InputStreamTaskFactory A super interface that allows the input stream to be set for reader task factories.VizmapReader An extension of the Task interface that returns aVisualStyle
object.VizmapReaderManager An object that registers all InputStreamReaderFactory singletons, processes specified input to determine the appropriate factory to use and then returns an instance of the correctVizmapReader
for the input. -
Class Summary Class Description AbstractCyNetworkReader AbstractInputStreamTaskFactory TODO: Missing documentation