Uses of Interface
org.cytoscape.io.CyFileFilter
Package
Description
Handle import/export of Cytoscape data structures to/from local files/remote URLs.
Handle importing Cytoscape data (network, attributes, session, properties, etc) from files/URLs.
This package provides factory interfaces to be used by anyone wishing to provide
export or writing capabilities to the rest of Cytoscape.
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Uses of CyFileFilter in org.cytoscape.io
Modifier and TypeClassDescriptionclass
This is meant to be an basic implementation ofCyFileFilter
that can either be used directly or extended to provide different acceptance criteria.Modifier and TypeMethodDescriptionCyFileFilterProvider.getFileFilter()
Return the file filter associated with the IOFactory. -
Uses of CyFileFilter in org.cytoscape.io.read
Modifier and TypeMethodDescriptionAbstractInputStreamTaskFactory.getFileFilter()
Return the file filter associated with the IOFactory. -
Uses of CyFileFilter in org.cytoscape.io.write
Modifier and TypeMethodDescriptionCyPropertyWriterManager.getAvailableWriterFilters()
Returns theCyFileFilter
s known to thisCyWriter
manager.CyWriterManager.getAvailableWriterFilters()
Returns a list of the availableCyFileFilter
s that define the available output types.Modifier and TypeMethodDescriptionCyWriterManager.getMatchingFactory(CyFileFilter filter)
Returns aCyWriterFactory
for the appropriate filter.CyNetworkViewWriterManager.getWriter(CyNetwork network, CyFileFilter filter, File file)
Returns theCyWriter
Task that will attempt to write the specified network to the specified file of the specified file type.CyNetworkViewWriterManager.getWriter(CyNetwork network, CyFileFilter filter, OutputStream os)
Returns theCyWriter
Task that will attempt to write the specified network to the specified output steam of the specified file type.CyNetworkViewWriterManager.getWriter(CyNetworkView view, CyFileFilter filter, File file)
Returns theCyWriter
Task that will attempt to write the specified view to the specified file of the specified file type.CyNetworkViewWriterManager.getWriter(CyNetworkView view, CyFileFilter filter, OutputStream os)
Returns theCyWriter
Task that will attempt to write the specified view to the specified output steam of the specified file type.CyPropertyWriterManager.getWriter(Object property, CyFileFilter filter, File file)
Returns theCyWriter
Task that will attempt to write the specified property object to the specified file of the specified file type.CyPropertyWriterManager.getWriter(Object property, CyFileFilter filter, OutputStream os)
Returns theCyWriter
Task that will attempt to write the specified property object to the specified output stream of the specified file type.CySessionWriterManager.getWriter(CySession session, CyFileFilter filter, File file)
Returns theCyWriter
Task that will attempt to write the specified session to the specified file of the specified file type.CySessionWriterManager.getWriter(CySession session, CyFileFilter filter, OutputStream os)
Returns theCyWriter
Task that will attempt to write the specified session to the specified output stream of the specified file type.CyTableWriterManager.getWriter(CyTable table, CyFileFilter filter, File file)
Returns theCyWriter
Task that will attempt to write the specified table to the specified file of the specified file type.CyTableWriterManager.getWriter(CyTable table, CyFileFilter filter, OutputStream os)
Returns theCyWriter
Task that will attempt to write the specified table to the specified output stream of the specified file type.PresentationWriterManager.getWriter(View<?> view, RenderingEngine<?> re, CyFileFilter filter, File file)
Returns theCyWriter
Task that will attempt to write the specified view to the specified file of the specified file type.PresentationWriterManager.getWriter(View<?> view, RenderingEngine<?> re, CyFileFilter filter, OutputStream os)
Returns theCyWriter
Task that will attempt to write the specified view to the specified output stream of the specified file type.VizmapWriterManager.getWriter(Set<VisualStyle> networkStyles, Set<VisualStyle> tableStyles, CyFileFilter filter, File file)
Returns theCyWriter
Task that will attempt to write the specified vizmap to the specified file of the specified file type.VizmapWriterManager.getWriter(Set<VisualStyle> networkStyles, Set<VisualStyle> tableStyles, CyFileFilter filter, OutputStream os)
Returns theCyWriter
Task that will attempt to write the specified vizmap to the specified output stream of the specified file type.VizmapWriterManager.getWriter(Set<VisualStyle> networkStyles, CyFileFilter filter, File file)
Returns theCyWriter
Task that will attempt to write the specified vizmap to the specified file of the specified file type.VizmapWriterManager.getWriter(Set<VisualStyle> networkStyles, CyFileFilter filter, OutputStream os)
Returns theCyWriter
Task that will attempt to write the specified vizmap to the specified output stream of the specified file type.