Uses of Package
org.cytoscape.io.read
Package
Description
This is the Cytoscape App API, which supports development of Cytoscape 3.X
apps in a manner similar to apps developed in Cytoscape 2.X.
Handle importing Cytoscape data (network, attributes, session, properties, etc) from files/URLs.
This package include a set of task factory interfaces that allow
the modification or editing of various objects within Cytoscape.
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ClassDescriptionAn object that registers all InputStreamReaderFactory singletons, processes specified input to determine the appropriate factory to use and then returns an instance of the correct
CyNetworkReader
for the input.An object that registers all InputStreamReaderFactory singletons, processes specified input to determine the appropriate factory to use and then returns an instance of the correctCyPropertyReader
for the input.An object that registers all InputStreamReaderFactory singletons, processes specified input to determine the appropriate factory to use and then returns an instance of the correctCySessionReader
for the input.An object that registers all InputStreamReaderFactory singletons, processes specified input to determine the appropriate factory to use and then returns an instance of the correctCyTableReader
for the input. -
ClassDescriptionAn extension of the Task interface that returns an array of
CyNetwork
objects that are read as part of the Task.An extension of the Task interface that returns a property object.An extension of the Task interface that returns aorg.cytoscape.property.session.Cysession
object.An extension of the Task interface that returns an array ofCyTable
objects.A super interface that allows the input stream to be set for reader task factories.An extension of the Task interface that returns aVisualStyle
object. -