Serialized Form

Package org.cytoscape.application.swing

Class org.cytoscape.application.swing.AbstractCyAction

class AbstractCyAction extends AbstractAction implements Serializable

Serialized Fields

acceleratorKeyStroke

KeyStroke acceleratorKeyStroke

The accelerator keystroke, if set.

acceleratorSet

boolean acceleratorSet

Indicates whether accelerator keys have been set for the action.

configurationProperties

Map<String,String> configurationProperties

The configuration properties. Adding it here allows extensions of this class to pass their own properties.

enabler

org.cytoscape.application.swing.AbstractEnableSupport enabler

A support class for deciding whether the action should be enabled.

inEdgeTableToolBar

boolean inEdgeTableToolBar

Indicates whether the action is in the Edge Table Panel's toolbar.

inMenuBar

boolean inMenuBar

Indicates whether the action is in a menu.

inNetworkTableToolBar

boolean inNetworkTableToolBar

Indicates whether the action is in the Network Table Panel's toolbar.

inNodeTableToolBar

boolean inNodeTableToolBar

Indicates whether the action is in the Node Table Panel's toolbar.

insertSeparatorAfter

boolean insertSeparatorAfter

Indicates whether a menu separator should be inserted after this item

insertSeparatorBefore

boolean insertSeparatorBefore

Indicates whether a menu separator should be inserted before this item

insertToolbarSeparatorAfter

boolean insertToolbarSeparatorAfter

Indicates whether a toolbar separator should be inserted after this item

insertToolbarSeparatorBefore

boolean insertToolbarSeparatorBefore

Indicates whether a toolbar separator should be inserted before this item

inToolBar

boolean inToolBar

Indicates whether the action is in the main toolbar.

inUnassignedTableToolBar

boolean inUnassignedTableToolBar

Indicates whether the action is in the Unassigned Tables Panel's toolbar.

menuGravity

float menuGravity

The float value placing the action within the menu. Value of 0.0 is the beginning and -1.0 means to sort alphabetically. App developers are strongly encouraged to set specific gravities within your own menus.

name

String name

The name of the action.

preferredMenu

String preferredMenu

The name describing the preferred menu for the action.

toolbarGravity

float toolbarGravity

The float value placing the action within the toolbar. Value of 0.0 is the beginning and -1.0 means to sort alphabetically. App developers are strongly encouraged to set specific gravities within your own menus.

toolTipImage

URL toolTipImage

Path to an optional tool tip image

useCheckBoxMenuItem

boolean useCheckBoxMenuItem

Indicates whether to use a checkbox menu item.

useToggleButton

boolean useToggleButton

Indicates whether to use a toggle button in the tool bar.

Class org.cytoscape.application.swing.CyColumnComboBox

class CyColumnComboBox extends JComboBox<CyColumn> implements Serializable

Serialized Fields

columnPresentationManager

CyColumnPresentationManager columnPresentationManager

enabledPredicate

Predicate<CyColumn> enabledPredicate

Class org.cytoscape.application.swing.CyColumnSelector

class CyColumnSelector extends JPanel implements Serializable

Serialized Fields

columnPresentationManager

CyColumnPresentationManager columnPresentationManager

iconManager

IconManager iconManager

namespaces

SortedMap<String,List<CyColumn>> namespaces

selectedColumnNames

Set<String> selectedColumnNames

Package org.cytoscape.cycl

Exception org.cytoscape.cycl.CyCLException

class CyCLException extends RuntimeException implements Serializable

Package org.cytoscape.equations

Exception org.cytoscape.equations.FunctionError

class FunctionError extends Exception implements Serializable

serialVersionUID:

-2671219600906051276L

Serialized Fields

argNumber

int argNumber

Package org.cytoscape.util.swing

Class org.cytoscape.util.swing.BasicCollapsiblePanel

class BasicCollapsiblePanel extends JPanel implements Serializable

serialVersionUID:

2010434345567315524L

Serialized Fields

arrowBtn

JButton arrowBtn

border

Border border

collapsed

boolean collapsed

collapseListeners

Vector<BasicCollapsiblePanel.CollapseListener> collapseListeners

contentPane

JPanel contentPane

titleComponent

AbstractButton titleComponent

Class org.cytoscape.util.swing.CheckBoxJList

class CheckBoxJList extends JList implements Serializable

serialVersionUID:

120233987581935L

Serialized Fields

firstIndex

int firstIndex

lastIndex

int lastIndex

selectionCache

Set<Integer> selectionCache

Class org.cytoscape.util.swing.ColorButton

class ColorButton extends JButton implements Serializable

serialVersionUID:

-580523607515901450L

Serialized Fields

borderColor

Color borderColor

color

Color color

palette

Palette palette

Class org.cytoscape.util.swing.CyToolTip

class CyToolTip extends JToolTip implements Serializable

Serialized Fields

comp

JComponent comp

desc

String desc

icon

Icon icon

longDesc

String longDesc

Class org.cytoscape.util.swing.DropDownMenuButton

class DropDownMenuButton extends JButton implements Serializable

Serialized Fields

buttonIcon

Icon buttonIcon

popupMenuActionListener

ActionListener popupMenuActionListener

Class org.cytoscape.util.swing.JStatusBar

class JStatusBar extends JPanel implements Serializable

serialVersionUID:

1202339875133611L

Serialized Fields

centerLabel

JLabel centerLabel

centerPanel

JPanel centerPanel

leftLabel

JLabel leftLabel

leftPanel

JPanel leftPanel

rightLabel

JLabel rightLabel

rightPanel

JPanel rightPanel

Class org.cytoscape.util.swing.JTreeTable

class JTreeTable extends JTable implements Serializable

serialVersionUID:

1202339868625600L

Serialized Fields

tree

org.cytoscape.util.swing.JTreeTable.TreeTableCellRenderer tree

Class org.cytoscape.util.swing.TextWrapToolTip

class TextWrapToolTip extends JToolTip implements Serializable

Class org.cytoscape.util.swing.TreeTableModelAdapter

class TreeTableModelAdapter extends AbstractTableModel implements Serializable

serialVersionUID:

1202339875193043L

Serialized Fields

tree

JTree tree

treeTableModel

TreeTableModel treeTableModel

Package org.cytoscape.work.swing

Class org.cytoscape.work.swing.AbstractGUITunableHandler.TunableFieldPanel

class TunableFieldPanel extends JPanel implements Serializable

serialVersionUID:

7445323343174359197L

Serialized Fields

control

Component control

label

JLabel label

multiLineLabel

JTextArea multiLineLabel