Hierarchy For All Packages
Package Hierarchies:- org.cytoscape.app,
- org.cytoscape.app.event,
- org.cytoscape.app.swing,
- org.cytoscape.application,
- org.cytoscape.application.events,
- org.cytoscape.application.swing,
- org.cytoscape.application.swing.events,
- org.cytoscape.application.swing.search,
- org.cytoscape.command,
- org.cytoscape.command.util,
- org.cytoscape.equations,
- org.cytoscape.equations.event,
- org.cytoscape.event,
- org.cytoscape.filter,
- org.cytoscape.filter.model,
- org.cytoscape.filter.predicates,
- org.cytoscape.filter.transformers,
- org.cytoscape.filter.view,
- org.cytoscape.group,
- org.cytoscape.group.data,
- org.cytoscape.group.events,
- org.cytoscape.io,
- org.cytoscape.io.datasource,
- org.cytoscape.io.read,
- org.cytoscape.io.util,
- org.cytoscape.io.webservice,
- org.cytoscape.io.webservice.client,
- org.cytoscape.io.webservice.events,
- org.cytoscape.io.webservice.swing,
- org.cytoscape.io.write,
- org.cytoscape.jobs,
- org.cytoscape.model,
- org.cytoscape.model.events,
- org.cytoscape.model.subnetwork,
- org.cytoscape.property,
- org.cytoscape.property.bookmark,
- org.cytoscape.service.util,
- org.cytoscape.service.util.internal,
- org.cytoscape.session,
- org.cytoscape.session.events,
- org.cytoscape.task,
- org.cytoscape.task.analyze,
- org.cytoscape.task.create,
- org.cytoscape.task.destroy,
- org.cytoscape.task.edit,
- org.cytoscape.task.hide,
- org.cytoscape.task.read,
- org.cytoscape.task.select,
- org.cytoscape.task.visualize,
- org.cytoscape.task.write,
- org.cytoscape.util.color,
- org.cytoscape.util.json,
- org.cytoscape.util.swing,
- org.cytoscape.view.layout,
- org.cytoscape.view.model,
- org.cytoscape.view.model.events,
- org.cytoscape.view.model.spacial,
- org.cytoscape.view.model.table,
- org.cytoscape.view.presentation,
- org.cytoscape.view.presentation.annotations,
- org.cytoscape.view.presentation.customgraphics,
- org.cytoscape.view.presentation.events,
- org.cytoscape.view.presentation.property,
- org.cytoscape.view.presentation.property.table,
- org.cytoscape.view.presentation.property.values,
- org.cytoscape.view.vizmap,
- org.cytoscape.view.vizmap.events,
- org.cytoscape.view.vizmap.events.table,
- org.cytoscape.view.vizmap.gui,
- org.cytoscape.view.vizmap.gui.editor,
- org.cytoscape.view.vizmap.gui.event,
- org.cytoscape.view.vizmap.gui.util,
- org.cytoscape.view.vizmap.mappings,
- org.cytoscape.work,
- org.cytoscape.work.json,
- org.cytoscape.work.properties,
- org.cytoscape.work.swing,
- org.cytoscape.work.swing.undo,
- org.cytoscape.work.swing.util,
- org.cytoscape.work.undo,
- org.cytoscape.work.util
Class Hierarchy
- java.lang.Object
- javax.swing.AbstractAction (implements javax.swing.Action, java.lang.Cloneable, java.io.Serializable)
- org.cytoscape.application.swing.AbstractCyAction (implements org.cytoscape.application.swing.CyAction)
- org.cytoscape.work.util.AbstractBounded<N>
- org.cytoscape.work.util.BoundedDouble
- org.cytoscape.work.util.BoundedFloat
- org.cytoscape.work.util.BoundedInteger
- org.cytoscape.work.util.BoundedLong
- org.cytoscape.util.swing.AbstractCellEditor (implements javax.swing.CellEditor)
- org.cytoscape.util.swing.JTreeTable.TreeTableCellEditor (implements javax.swing.table.TableCellEditor)
- org.cytoscape.property.AbstractConfigDirPropsReader (implements org.cytoscape.property.CyProperty<P>)
- org.cytoscape.service.util.AbstractCyActivator (implements org.osgi.framework.BundleActivator)
- org.cytoscape.service.util.internal.CyActivator
- org.cytoscape.app.AbstractCyApp
- org.cytoscape.app.swing.AbstractCySwingApp
- org.cytoscape.work.undo.AbstractCyEdit
- org.cytoscape.view.layout.LayoutEdit
- org.cytoscape.event.AbstractCyEvent<T> (implements org.cytoscape.event.CyEvent<T>)
- org.cytoscape.view.model.events.AboutToRemoveColumnViewEvent
- org.cytoscape.model.events.AboutToRemoveEdgesEvent
- org.cytoscape.model.events.AboutToRemoveNodesEvent
- org.cytoscape.event.AbstractCyPayloadEvent<T,P> (implements org.cytoscape.event.CyPayloadEvent<S,P>)
- org.cytoscape.view.model.events.AboutToRemoveEdgeViewsEvent
- org.cytoscape.view.model.events.AboutToRemoveNodeViewsEvent
- org.cytoscape.view.model.events.AboutToRemoveRowViewsEvent
- org.cytoscape.model.events.AddedEdgesEvent
- org.cytoscape.view.model.events.AddedEdgeViewsEvent
- org.cytoscape.model.events.AddedNodesEvent
- org.cytoscape.view.model.events.AddedNodeViewsEvent
- org.cytoscape.view.model.events.AddedRowViewsEvent
- org.cytoscape.equations.event.EquationFunctionAddedEvent
- org.cytoscape.equations.event.EquationFunctionRemovedEvent
- org.cytoscape.model.events.RowsCreatedEvent
- org.cytoscape.model.events.RowsSetEvent
- org.cytoscape.view.model.events.TableViewChangedEvent<T>
- org.cytoscape.view.model.events.ViewChangedEvent<T>
- org.cytoscape.view.vizmap.events.VisualMappingFunctionChangedEvent
- org.cytoscape.view.vizmap.events.VisualStyleChangedEvent
- org.cytoscape.view.model.events.AddedColumnViewEvent
- org.cytoscape.app.event.AppsFinishedStartingEvent
- org.cytoscape.model.events.ColumnCreatedEvent
- org.cytoscape.model.events.ColumnDeletedEvent
- org.cytoscape.model.events.ColumnNameChangedEvent
- org.cytoscape.view.vizmap.events.table.ColumnVisualStyleSetEvent
- org.cytoscape.application.events.CyShutdownEvent
- org.cytoscape.application.events.CyStartEvent
- org.cytoscape.application.swing.events.CytoPanelComponentSelectedEvent
- org.cytoscape.application.swing.events.CytoPanelStateChangedEvent
- org.cytoscape.io.webservice.events.DataImportFinishedEvent<T>
- org.cytoscape.view.model.events.FitContentEvent
- org.cytoscape.view.model.events.FitSelectedEvent
- org.cytoscape.group.events.GroupAboutToBeDestroyedEvent
- org.cytoscape.group.events.GroupAboutToBeRemovedEvent
- org.cytoscape.group.events.GroupAboutToCollapseEvent
- org.cytoscape.group.events.GroupAddedEvent
- org.cytoscape.group.events.GroupAddedToNetworkEvent
- org.cytoscape.group.events.GroupCollapsedEvent
- org.cytoscape.group.events.GroupEdgesAddedEvent
- org.cytoscape.group.events.GroupEdgesRemovedEvent
- org.cytoscape.group.events.GroupNodesAddedEvent
- org.cytoscape.group.events.GroupNodesRemovedEvent
- org.cytoscape.view.vizmap.gui.event.LexiconStateChangedEvent
- org.cytoscape.model.events.NetworkAboutToBeDestroyedEvent
- org.cytoscape.model.events.NetworkAddedEvent
- org.cytoscape.model.events.NetworkDestroyedEvent
- org.cytoscape.view.model.events.NetworkViewAboutToBeDestroyedEvent
- org.cytoscape.view.model.events.NetworkViewAddedEvent
- org.cytoscape.view.model.events.NetworkViewDestroyedEvent
- org.cytoscape.application.swing.events.PreferencesUpdatedEvent
- org.cytoscape.property.PropertyUpdatedEvent
- org.cytoscape.model.events.RemovedEdgesEvent
- org.cytoscape.model.events.RemovedNodesEvent
- org.cytoscape.view.presentation.events.RenderingEngineAboutToBeRemovedEvent
- org.cytoscape.view.presentation.events.RenderingEngineAddedEvent
- org.cytoscape.model.events.RowsDeletedEvent
- org.cytoscape.io.webservice.events.SearchFinishedEvent<T>
- org.cytoscape.model.events.SelectedNodesAndEdgesEvent
- org.cytoscape.session.events.SessionAboutToBeLoadedEvent
- org.cytoscape.session.events.SessionAboutToBeSavedEvent
- org.cytoscape.session.events.SessionLoadCancelledEvent
- org.cytoscape.session.events.SessionLoadedEvent
- org.cytoscape.session.events.SessionSaveCancelledEvent
- org.cytoscape.session.events.SessionSavedEvent
- org.cytoscape.application.events.SetCurrentNetworkEvent
- org.cytoscape.application.events.SetCurrentNetworkViewEvent
- org.cytoscape.application.events.SetCurrentRenderingEngineEvent
- org.cytoscape.application.events.SetCurrentTableEvent
- org.cytoscape.view.vizmap.events.SetCurrentVisualStyleEvent
- org.cytoscape.model.events.SetNetworkPointerEvent
- org.cytoscape.application.events.SetSelectedNetworksEvent
- org.cytoscape.application.events.SetSelectedNetworkViewsEvent
- org.cytoscape.model.events.TableAboutToBeDeletedEvent
- org.cytoscape.model.events.TableAddedEvent
- org.cytoscape.model.events.TableDeletedEvent
- org.cytoscape.model.events.TablePrivacyChangedEvent
- org.cytoscape.model.events.TableTitleChangedEvent
- org.cytoscape.view.model.events.TableViewAboutToBeDestroyedEvent
- org.cytoscape.view.model.events.TableViewAddedEvent
- org.cytoscape.view.model.events.TableViewDestroyedEvent
- org.cytoscape.model.events.UnsetNetworkPointerEvent
- org.cytoscape.view.model.events.UpdateNetworkPresentationEvent
- org.cytoscape.view.vizmap.events.VisualPropertyDependencyChangedEvent
- org.cytoscape.view.vizmap.events.VisualStyleAboutToBeRemovedEvent
- org.cytoscape.view.vizmap.events.VisualStyleAddedEvent
- org.cytoscape.view.vizmap.events.VisualStyleSetEvent
- org.cytoscape.jobs.AbstractCyJob (implements org.cytoscape.jobs.CyJob)
- org.cytoscape.task.AbstractEdgeViewTaskFactory (implements org.cytoscape.task.EdgeViewTaskFactory)
- org.cytoscape.equations.AbstractFunction (implements org.cytoscape.equations.Function)
- org.cytoscape.io.read.AbstractInputStreamTaskFactory (implements org.cytoscape.io.read.InputStreamTaskFactory)
- org.cytoscape.view.layout.AbstractLayoutAlgorithm (implements org.cytoscape.view.layout.CyLayoutAlgorithm)
- org.cytoscape.task.AbstractNetworkCollectionTaskFactory (implements org.cytoscape.task.NetworkCollectionTaskFactory)
- org.cytoscape.task.AbstractNetworkTaskFactory (implements org.cytoscape.task.NetworkTaskFactory)
- org.cytoscape.task.AbstractNetworkViewCollectionTaskFactory (implements org.cytoscape.task.NetworkViewCollectionTaskFactory)
- org.cytoscape.task.AbstractNetworkViewLocationTaskFactory (implements org.cytoscape.task.NetworkViewLocationTaskFactory)
- org.cytoscape.task.AbstractNetworkViewTaskFactory (implements org.cytoscape.task.NetworkViewTaskFactory)
- org.cytoscape.equations.AbstractNode (implements org.cytoscape.equations.TreeNode)
- org.cytoscape.task.AbstractNodeViewTaskFactory (implements org.cytoscape.task.NodeViewTaskFactory)
- org.cytoscape.task.AbstractRootNetworkCollectionTaskFactory (implements org.cytoscape.task.RootNetworkCollectionTaskFactory)
- org.cytoscape.task.AbstractTableCellTaskFactory (implements org.cytoscape.task.TableCellTaskFactory)
- org.cytoscape.task.AbstractTableColumnTaskFactory (implements org.cytoscape.task.TableColumnTaskFactory)
- javax.swing.table.AbstractTableModel (implements java.io.Serializable, javax.swing.table.TableModel)
- org.cytoscape.util.swing.TreeTableModelAdapter
- org.cytoscape.task.AbstractTableTaskFactory (implements org.cytoscape.task.TableTaskFactory)
- org.cytoscape.work.AbstractTask (implements org.cytoscape.work.Task)
- org.cytoscape.io.read.AbstractCyNetworkReader (implements org.cytoscape.io.read.CyNetworkReader)
- org.cytoscape.task.AbstractEdgeViewTask
- org.cytoscape.view.layout.AbstractLayoutTask
- org.cytoscape.view.layout.AbstractPartitionLayoutTask
- org.cytoscape.view.layout.AbstractParallelPartitionLayoutTask
- org.cytoscape.view.layout.AbstractPartitionLayoutTask
- org.cytoscape.task.AbstractNetworkCollectionTask
- org.cytoscape.task.AbstractNetworkTask
- org.cytoscape.task.AbstractNetworkViewCollectionTask
- org.cytoscape.task.AbstractNetworkViewTask
- org.cytoscape.task.AbstractNodeViewTask
- org.cytoscape.task.AbstractRootNetworkCollectionTask
- org.cytoscape.task.AbstractRowTask
- org.cytoscape.task.AbstractTableCellTask
- org.cytoscape.task.AbstractTableColumnTask
- org.cytoscape.task.AbstractTableTask
- org.cytoscape.work.AbstractTaskFactory (implements org.cytoscape.work.TaskFactory)
- org.cytoscape.application.swing.search.AbstractNetworkSearchTaskFactory (implements org.cytoscape.application.swing.search.NetworkSearchTaskFactory)
- org.cytoscape.work.AbstractTaskManager<T,C> (implements org.cytoscape.work.TaskManager<T,C>)
- org.cytoscape.application.swing.AbstractToolBarComponent (implements org.cytoscape.application.swing.ToolBarComponent)
- org.cytoscape.filter.model.AbstractTransformer<C,E> (implements org.cytoscape.filter.model.Transformer<C,E>)
- org.cytoscape.filter.model.AbstractValidatableTransformer<C,E> (implements org.cytoscape.filter.model.ValidatableTransformer<C,E>)
- org.cytoscape.util.swing.AbstractTreeTableModel (implements org.cytoscape.util.swing.TreeTableModel)
- org.cytoscape.work.AbstractTunableHandler (implements org.cytoscape.work.TunableHandler)
- org.cytoscape.work.swing.AbstractGUITunableHandler (implements org.cytoscape.work.swing.GUITunableHandler)
- org.cytoscape.command.AbstractStringTunableHandler (implements org.cytoscape.command.StringTunableHandler)
- org.cytoscape.work.AbstractTunableInterceptor<T>
- org.cytoscape.application.swing.AbstractViewUpdater<S> (implements org.cytoscape.model.events.RowsSetListener)
- org.cytoscape.view.presentation.property.AbstractVisualLexicon (implements org.cytoscape.view.model.VisualLexicon)
- org.cytoscape.view.presentation.property.table.BasicTableVisualLexicon
- org.cytoscape.view.presentation.property.BasicVisualLexicon
- org.cytoscape.view.vizmap.mappings.AbstractVisualMappingFunction<K,V> (implements org.cytoscape.view.vizmap.VisualMappingFunction<K,V>)
- org.cytoscape.view.model.AbstractVisualProperty<T> (implements org.cytoscape.view.model.VisualProperty<T>)
- org.cytoscape.view.presentation.property.ArrowShapeVisualProperty
- org.cytoscape.view.presentation.property.BooleanVisualProperty
- org.cytoscape.view.presentation.property.table.CellFormatVisualProperty
- org.cytoscape.view.presentation.property.DefaultVisualizableVisualProperty
- org.cytoscape.view.presentation.property.DoubleVisualProperty
- org.cytoscape.view.presentation.property.EdgeBendVisualProperty
- org.cytoscape.view.presentation.property.EdgeStackingVisualProperty
- org.cytoscape.view.presentation.property.FontVisualProperty
- org.cytoscape.view.presentation.property.IntegerVisualProperty
- org.cytoscape.view.presentation.property.LineTypeVisualProperty
- org.cytoscape.view.presentation.property.NodeShapeVisualProperty
- org.cytoscape.view.presentation.property.NullVisualProperty
- org.cytoscape.view.presentation.property.ObjectPositionVisualProperty
- org.cytoscape.view.presentation.property.PaintVisualProperty
- org.cytoscape.view.presentation.property.StringVisualProperty
- org.cytoscape.view.presentation.property.table.TableModeVisualProperty
- org.cytoscape.view.vizmap.gui.editor.AbstractVisualPropertyEditor<T> (implements org.cytoscape.view.vizmap.gui.editor.VisualPropertyEditor<T>)
- org.cytoscape.view.presentation.property.values.AbstractVisualPropertyValue (implements org.cytoscape.view.presentation.property.values.VisualPropertyValue)
- org.cytoscape.io.webservice.client.AbstractWebServiceClient (implements org.cytoscape.io.webservice.WebServiceClient)
- org.cytoscape.io.webservice.swing.AbstractWebServiceGUIClient (implements org.cytoscape.io.webservice.swing.WebServiceGUIClient)
- org.cytoscape.application.swing.ActionEnableSupport
- org.cytoscape.equations.ArgDescriptor
- org.cytoscape.io.BasicCyFileFilter (implements org.cytoscape.io.CyFileFilter)
- org.cytoscape.work.BasicTunableHandlerFactory<T> (implements org.cytoscape.work.TunableHandlerFactory<T>)
- org.cytoscape.work.swing.SimpleGUITunableHandlerFactory<T> (implements org.cytoscape.work.swing.GUITunableHandlerFactory<T>)
- org.cytoscape.view.vizmap.mappings.BoundaryRangeValues<T>
- org.cytoscape.view.presentation.property.table.CellFormat
- org.cytoscape.equations.CodeAndSourceLocation
- org.cytoscape.util.color.ColorUtils
- org.cytoscape.util.swing.ColumnResizer
- java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
- java.awt.Container
- javax.swing.JComponent (implements java.io.Serializable)
- javax.swing.AbstractButton (implements java.awt.ItemSelectable, javax.swing.SwingConstants)
- javax.swing.JButton (implements javax.accessibility.Accessible)
- org.cytoscape.util.swing.ColorButton
- org.cytoscape.util.swing.DropDownMenuButton
- javax.swing.JButton (implements javax.accessibility.Accessible)
- javax.swing.JComboBox<E> (implements javax.accessibility.Accessible, java.awt.event.ActionListener, java.awt.ItemSelectable, javax.swing.event.ListDataListener)
- org.cytoscape.application.swing.CyColumnComboBox
- javax.swing.JList<E> (implements javax.accessibility.Accessible, javax.swing.Scrollable)
- org.cytoscape.util.swing.CheckBoxJList (implements javax.swing.event.ListSelectionListener)
- javax.swing.JPanel (implements javax.accessibility.Accessible)
- org.cytoscape.work.swing.AbstractGUITunableHandler.TunableFieldPanel
- org.cytoscape.util.swing.BasicCollapsiblePanel
- org.cytoscape.application.swing.CyColumnSelector
- org.cytoscape.util.swing.JStatusBar
- javax.swing.JTable (implements javax.accessibility.Accessible, javax.swing.event.CellEditorListener, javax.swing.event.ListSelectionListener, javax.swing.event.RowSorterListener, javax.swing.Scrollable, javax.swing.event.TableColumnModelListener, javax.swing.event.TableModelListener)
- org.cytoscape.util.swing.JTreeTable
- javax.swing.JToolTip (implements javax.accessibility.Accessible)
- org.cytoscape.util.swing.CyToolTip
- org.cytoscape.util.swing.TextWrapToolTip
- javax.swing.AbstractButton (implements java.awt.ItemSelectable, javax.swing.SwingConstants)
- javax.swing.JComponent (implements java.io.Serializable)
- java.awt.Container
- org.cytoscape.view.vizmap.mappings.ContinuousMappingPoint<K,V>
- org.cytoscape.view.model.ContinuousRange<T> (implements org.cytoscape.view.model.Range<T>)
- org.cytoscape.util.swing.CyColorChooser
- org.cytoscape.view.model.table.CyColumnViewMetadata
- org.cytoscape.jobs.CyJobStatus
- org.cytoscape.application.swing.CyMenuItem
- org.cytoscape.view.model.table.CyRowViewMetadata
- org.cytoscape.service.util.internal.CyServiceRegistrarFactory (implements org.osgi.framework.ServiceFactory<S>)
- org.cytoscape.service.util.internal.CyServiceRegistrarImpl (implements org.cytoscape.service.util.CyServiceRegistrar)
- org.cytoscape.session.CySession
- org.cytoscape.session.CySession.Builder
- org.cytoscape.model.CyTableUtil
- org.cytoscape.view.model.table.CyTableViewMetadata
- org.cytoscape.event.DebounceTimer
- org.cytoscape.io.datasource.DefaultDataSource (implements org.cytoscape.io.datasource.DataSource)
- org.cytoscape.view.model.DiscreteRange<T> (implements org.cytoscape.view.model.Range<T>)
- org.cytoscape.command.util.EdgeList
- org.cytoscape.view.layout.EdgeWeighter
- org.cytoscape.equations.Equation
- org.cytoscape.equations.EquationUtil
- javax.swing.filechooser.FileFilter
- org.cytoscape.util.swing.FileChooserFilter
- org.cytoscape.work.FinishStatus
- org.cytoscape.equations.FunctionUtil
- org.cytoscape.equations.IdentDescriptor
- org.cytoscape.util.swing.JMenuTracker
- org.cytoscape.view.layout.LayoutEdge (implements java.lang.Comparable<T>)
- org.cytoscape.view.layout.LayoutNode (implements java.lang.Comparable<T>)
- org.cytoscape.view.layout.LayoutPartition
- org.cytoscape.view.layout.LayoutPoint
- org.cytoscape.work.util.ListSelection<T>
- org.cytoscape.work.util.ListMultipleSelection<T>
- org.cytoscape.work.util.ListSingleSelection<T>
- org.cytoscape.util.swing.LookAndFeelUtil
- org.cytoscape.util.swing.MenuGravityTracker (implements org.cytoscape.util.swing.GravityTracker)
- org.cytoscape.util.swing.MessageDialogs
- org.cytoscape.command.util.NodeList
- org.cytoscape.view.presentation.property.values.ObjectPosition
- org.cytoscape.view.layout.PartitionUtil
- org.cytoscape.util.swing.PopupMenuGravityTracker (implements org.cytoscape.util.swing.GravityTracker)
- org.cytoscape.view.vizmap.gui.util.PropertySheetUtil
- org.cytoscape.command.util.RowList
- org.cytoscape.model.events.RowSetRecord
- org.cytoscape.property.SimpleCyProperty<P> (implements org.cytoscape.property.CyProperty<P>)
- org.cytoscape.model.SUIDFactory
- org.cytoscape.jobs.SUIDUtil
- org.cytoscape.work.TaskIterator (implements java.util.Iterator<E>)
- org.cytoscape.util.swing.TextIcon (implements javax.swing.Icon)
- java.lang.Throwable (implements java.io.Serializable)
- java.lang.Exception
- org.cytoscape.equations.FunctionError
- java.lang.Exception
- org.cytoscape.equations.Token
- org.cytoscape.work.TunableGravityOrderer (implements java.util.Comparator<T>)
- org.cytoscape.work.swing.util.UserAction
- org.cytoscape.filter.model.ValidationWarning
- org.cytoscape.view.model.events.ViewChangeRecord<T>
- org.cytoscape.view.model.VisualLexiconNode (implements java.lang.Comparable<T>)
- org.cytoscape.view.vizmap.events.VisualMappingFunctionChangeRecord
- org.cytoscape.view.vizmap.VisualPropertyDependency<T>
- org.cytoscape.view.presentation.property.VisualPropertyUtil
- org.cytoscape.view.vizmap.events.VisualStyleChangeRecord
- javax.swing.AbstractAction (implements javax.swing.Action, java.lang.Cloneable, java.io.Serializable)
Interface Hierarchy
- org.cytoscape.group.data.Aggregator<T>
- org.cytoscape.view.presentation.annotations.Annotation
- org.cytoscape.view.presentation.annotations.ArrowAnnotation
- org.cytoscape.view.presentation.annotations.GroupAnnotation
- org.cytoscape.view.presentation.annotations.ShapeAnnotation
- org.cytoscape.view.presentation.annotations.BoundedTextAnnotation
- org.cytoscape.view.presentation.annotations.ImageAnnotation
- org.cytoscape.view.presentation.annotations.TextAnnotation
- org.cytoscape.view.presentation.annotations.AnnotationFactory<T>
- org.cytoscape.view.presentation.annotations.AnnotationManager
- org.cytoscape.command.AvailableCommands
- org.cytoscape.view.presentation.property.values.Bend
- org.cytoscape.view.presentation.property.values.BendFactory
- org.cytoscape.property.bookmark.BookmarksUtil
- org.cytoscape.work.util.BoundedChangeListener<N>
- org.cytoscape.command.CommandExecutorTaskFactory
- org.cytoscape.view.vizmap.gui.editor.ContinuousMappingCellRendererFactory
- org.cytoscape.view.vizmap.gui.editor.ContinuousMappingEditor<K,V>
- org.cytoscape.view.presentation.customgraphics.CustomGraphicLayer
- org.cytoscape.view.presentation.customgraphics.Cy2DGraphicLayer
- org.cytoscape.view.presentation.customgraphics.ImageCustomGraphicLayer
- org.cytoscape.view.presentation.customgraphics.PaintedShape
- org.cytoscape.app.CyAppAdapter
- org.cytoscape.app.swing.CySwingAppAdapter
- org.cytoscape.application.CyApplicationConfiguration
- org.cytoscape.application.CyApplicationManager
- org.cytoscape.util.swing.CyColorPaletteChooser
- org.cytoscape.util.swing.CyColorPaletteChooserFactory
- org.cytoscape.view.presentation.property.values.CyColumnIdentifier
- org.cytoscape.view.presentation.property.values.CyColumnIdentifierFactory
- org.cytoscape.application.swing.CyColumnPresentation
- org.cytoscape.application.swing.CyColumnPresentationManager
- org.cytoscape.view.presentation.customgraphics.CyCustomGraphics<T>
- org.cytoscape.view.presentation.customgraphics.CyCustomGraphics2<T> (also extends org.cytoscape.view.presentation.property.values.VisualPropertyValue)
- org.cytoscape.view.presentation.customgraphics.CyCustomGraphics2Factory<T>
- org.cytoscape.view.presentation.customgraphics.CyCustomGraphicsFactory<T>
- org.cytoscape.model.CyDisposable
- org.cytoscape.model.CyNetwork (also extends org.cytoscape.model.CyIdentifiable)
- org.cytoscape.model.subnetwork.CyRootNetwork
- org.cytoscape.model.subnetwork.CySubNetwork
- org.cytoscape.view.model.CyNetworkView (also extends org.cytoscape.view.model.View<S>)
- org.cytoscape.view.model.CyNetworkViewSnapshot
- org.cytoscape.view.model.NullCyNetworkView
- org.cytoscape.view.model.table.CyTableView (also extends org.cytoscape.view.model.View<S>)
- org.cytoscape.view.presentation.RenderingEngine<T>
- org.cytoscape.model.CyNetwork (also extends org.cytoscape.model.CyIdentifiable)
- org.cytoscape.application.swing.CyEdgeViewContextMenuFactory
- org.cytoscape.event.CyEvent<T>
- org.cytoscape.event.CyPayloadEvent<S,P>
- org.cytoscape.event.CyEventHelper
- org.cytoscape.io.CyFileFilter
- org.cytoscape.io.CyFileFilterProvider
- org.cytoscape.io.write.CyWriterFactory
- org.cytoscape.io.write.CyNetworkViewWriterFactory
- org.cytoscape.io.write.CyPropertyWriterFactory
- org.cytoscape.io.write.CySessionWriterFactory
- org.cytoscape.io.write.CyTableWriterFactory
- org.cytoscape.io.write.PresentationWriterFactory
- org.cytoscape.io.write.VizmapWriterFactory
- org.cytoscape.io.read.InputStreamTaskFactory
- org.cytoscape.io.write.CyWriterFactory
- org.cytoscape.group.CyGroup
- org.cytoscape.group.data.CyGroupAggregationManager
- org.cytoscape.group.CyGroupFactory
- org.cytoscape.group.CyGroupManager
- org.cytoscape.group.CyGroupSettingsManager
- org.cytoscape.application.swing.CyHelpBroker
- org.cytoscape.model.CyIdentifiable
- org.cytoscape.model.CyColumn
- org.cytoscape.model.CyEdge
- org.cytoscape.model.CyNetwork (also extends org.cytoscape.model.CyDisposable)
- org.cytoscape.model.subnetwork.CyRootNetwork
- org.cytoscape.model.subnetwork.CySubNetwork
- org.cytoscape.model.CyNode
- org.cytoscape.model.CyRow
- org.cytoscape.model.CyTable
- org.cytoscape.view.model.View<S>
- org.cytoscape.view.model.table.CyColumnView
- org.cytoscape.view.model.CyNetworkView (also extends org.cytoscape.model.CyDisposable)
- org.cytoscape.view.model.CyNetworkViewSnapshot
- org.cytoscape.view.model.NullCyNetworkView
- org.cytoscape.view.model.table.CyTableView (also extends org.cytoscape.model.CyDisposable)
- org.cytoscape.jobs.CyJob
- org.cytoscape.jobs.CyJobData
- org.cytoscape.jobs.CyJobDataService
- org.cytoscape.jobs.CyJobExecutionService
- org.cytoscape.jobs.CyJobManager
- org.cytoscape.jobs.CyJobMonitor
- org.cytoscape.util.json.CyJSONUtil
- org.cytoscape.view.layout.CyLayoutAlgorithm
- org.cytoscape.view.layout.CyLayoutAlgorithmManager
- org.cytoscape.event.CyListener
- org.cytoscape.view.model.events.AboutToRemoveColumnViewListener
- org.cytoscape.model.events.AboutToRemoveEdgesListener
- org.cytoscape.view.model.events.AboutToRemoveEdgeViewsListener
- org.cytoscape.model.events.AboutToRemoveNodesListener
- org.cytoscape.view.model.events.AboutToRemoveNodeViewsListener
- org.cytoscape.view.model.events.AboutToRemoveRowViewsListener
- org.cytoscape.view.model.events.AddedColumnViewListener
- org.cytoscape.model.events.AddedEdgesListener
- org.cytoscape.view.model.events.AddedEdgeViewsListener
- org.cytoscape.model.events.AddedNodesListener
- org.cytoscape.view.model.events.AddedNodeViewsListener
- org.cytoscape.view.model.events.AddedRowViewsListener
- org.cytoscape.app.event.AppsFinishedStartingListener
- org.cytoscape.model.events.ColumnCreatedListener
- org.cytoscape.model.events.ColumnDeletedListener
- org.cytoscape.model.events.ColumnNameChangedListener
- org.cytoscape.view.vizmap.events.table.ColumnVisualStyleSetListener
- org.cytoscape.application.events.CyShutdownListener
- org.cytoscape.application.events.CyStartListener
- org.cytoscape.application.swing.events.CytoPanelComponentSelectedListener
- org.cytoscape.application.swing.events.CytoPanelStateChangedListener
- org.cytoscape.equations.event.EquationFunctionAddedListener
- org.cytoscape.equations.event.EquationFunctionRemovedListener
- org.cytoscape.view.model.events.FitContentListener
- org.cytoscape.view.model.events.FitSelectedListener
- org.cytoscape.group.events.GroupAboutToBeDestroyedListener
- org.cytoscape.group.events.GroupAboutToBeRemovedListener
- org.cytoscape.group.events.GroupAboutToCollapseListener
- org.cytoscape.group.events.GroupAddedListener
- org.cytoscape.group.events.GroupAddedToNetworkListener
- org.cytoscape.group.events.GroupCollapsedListener
- org.cytoscape.group.events.GroupEdgesAddedListener
- org.cytoscape.group.events.GroupEdgesRemovedListener
- org.cytoscape.group.events.GroupNodesAddedListener
- org.cytoscape.group.events.GroupNodesRemovedListener
- org.cytoscape.model.events.NetworkAboutToBeDestroyedListener
- org.cytoscape.model.events.NetworkAddedListener
- org.cytoscape.model.events.NetworkDestroyedListener
- org.cytoscape.view.model.events.NetworkViewAboutToBeDestroyedListener
- org.cytoscape.view.model.events.NetworkViewAddedListener
- org.cytoscape.view.model.events.NetworkViewDestroyedListener
- org.cytoscape.application.swing.events.PreferencesUpdatedListener
- org.cytoscape.property.PropertyUpdatedListener
- org.cytoscape.model.events.RemovedEdgesListener
- org.cytoscape.model.events.RemovedNodesListener
- org.cytoscape.view.presentation.events.RenderingEngineAddedListener
- org.cytoscape.model.events.RowsCreatedListener
- org.cytoscape.model.events.RowsDeletedListener
- org.cytoscape.model.events.RowsSetListener
- org.cytoscape.model.events.SelectedNodesAndEdgesListener
- org.cytoscape.session.events.SessionAboutToBeLoadedListener
- org.cytoscape.session.events.SessionAboutToBeSavedListener
- org.cytoscape.session.events.SessionLoadCancelledListener
- org.cytoscape.session.events.SessionLoadedListener
- org.cytoscape.session.events.SessionSaveCancelledListener
- org.cytoscape.session.events.SessionSavedListener
- org.cytoscape.application.events.SetCurrentNetworkListener
- org.cytoscape.application.events.SetCurrentNetworkViewListener
- org.cytoscape.application.events.SetCurrentRenderingEngineListener
- org.cytoscape.application.events.SetCurrentTableListener
- org.cytoscape.view.vizmap.events.SetCurrentVisualStyleListener
- org.cytoscape.model.events.SetNetworkPointerListener
- org.cytoscape.application.events.SetSelectedNetworksListener
- org.cytoscape.application.events.SetSelectedNetworkViewsListener
- org.cytoscape.model.events.TableAboutToBeDeletedListener
- org.cytoscape.model.events.TableAddedListener
- org.cytoscape.model.events.TableDeletedListener
- org.cytoscape.model.events.TablePrivacyChangedListener
- org.cytoscape.model.events.TableTitleChangedListener
- org.cytoscape.view.model.events.TableViewAboutToBeDestroyedListener
- org.cytoscape.view.model.events.TableViewAddedListener
- org.cytoscape.view.model.events.TableViewChangedListener
- org.cytoscape.view.model.events.TableViewDestroyedListener
- org.cytoscape.model.events.UnsetNetworkPointerListener
- org.cytoscape.view.model.events.UpdateNetworkPresentationListener
- org.cytoscape.view.model.events.ViewChangedListener
- org.cytoscape.view.vizmap.events.VisualMappingFunctionChangedListener
- org.cytoscape.view.vizmap.events.VisualPropertyDependencyChangedListener
- org.cytoscape.view.vizmap.events.VisualStyleAboutToBeRemovedListener
- org.cytoscape.view.vizmap.events.VisualStyleAddedListener
- org.cytoscape.view.vizmap.events.VisualStyleChangedListener
- org.cytoscape.view.vizmap.events.VisualStyleSetListener
- org.cytoscape.model.CyNetworkFactory
- org.cytoscape.model.CyNetworkManager
- org.cytoscape.session.CyNetworkNaming
- org.cytoscape.io.read.CyNetworkReaderManager
- org.cytoscape.model.CyNetworkTableManager
- org.cytoscape.application.swing.CyNetworkViewContextMenuFactory
- org.cytoscape.application.swing.CyNetworkViewDesktopMgr
- org.cytoscape.view.model.CyNetworkViewFactory
- org.cytoscape.view.model.CyNetworkViewFactoryConfig
- org.cytoscape.view.model.CyNetworkViewFactoryProvider
- org.cytoscape.view.model.CyNetworkViewListener
- org.cytoscape.view.model.CyNetworkViewManager
- org.cytoscape.application.swing.CyNodeViewContextMenuFactory
- org.cytoscape.property.CyProperty<P>
- org.cytoscape.io.read.CyPropertyReaderManager
- org.cytoscape.model.subnetwork.CyRootNetworkManager
- org.cytoscape.service.util.CyServiceRegistrar
- org.cytoscape.session.CySessionManager
- org.cytoscape.io.read.CySessionReaderManager
- org.cytoscape.application.CyShutdown
- org.cytoscape.application.swing.CySwingApplication
- org.cytoscape.model.CyTableFactory
- org.cytoscape.model.CyTableManager
- org.cytoscape.model.CyTableMetadata
- org.cytoscape.io.read.CyTableReaderManager
- org.cytoscape.view.model.table.CyTableViewFactory
- org.cytoscape.view.model.table.CyTableViewFactoryProvider
- org.cytoscape.view.model.table.CyTableViewManager
- org.cytoscape.application.swing.CytoPanel
- org.cytoscape.application.swing.CytoPanelComponent
- org.cytoscape.application.swing.CytoPanelComponent2
- org.cytoscape.io.read.CyTransformerReader
- org.cytoscape.io.write.CyTransformerWriter
- org.cytoscape.application.CyUserLog
- org.cytoscape.application.CyVersion
- org.cytoscape.io.write.CyWriterManager<W>
- org.cytoscape.io.write.CyNetworkViewWriterManager
- org.cytoscape.io.write.CyPropertyWriterManager
- org.cytoscape.io.write.CySessionWriterManager
- org.cytoscape.io.write.CyTableWriterManager
- org.cytoscape.io.write.PresentationWriterManager
- org.cytoscape.io.write.VizmapWriterManager
- org.cytoscape.io.webservice.events.DataImportFinishedListener
- org.cytoscape.io.datasource.DataSource
- org.cytoscape.io.datasource.DataSourceManager
- org.cytoscape.view.vizmap.gui.DefaultViewEditor
- org.cytoscape.view.vizmap.gui.DefaultViewPanel
- org.cytoscape.work.swing.DirectlyPresentableTunableHandler
- org.cytoscape.view.vizmap.gui.util.DiscreteMappingGenerator<V>
- org.cytoscape.task.DynamicTaskFactoryProvisioner
- org.cytoscape.view.model.spacial.EdgeSpacialIndex2DEnumerator
- org.cytoscape.task.EdgeViewTaskFactory
- org.cytoscape.view.vizmap.gui.editor.EditorManager
- org.cytoscape.equations.EquationCompiler
- org.cytoscape.equations.EquationParser
- org.cytoscape.equations.EquationTokeniser
- java.util.EventListener
- java.awt.event.ActionListener
- javax.swing.Action
- org.cytoscape.application.swing.CyAction (also extends javax.swing.event.MenuListener, javax.swing.event.PopupMenuListener)
- javax.swing.Action
- org.cytoscape.util.swing.BasicCollapsiblePanel.CollapseListener
- javax.swing.event.MenuListener
- org.cytoscape.application.swing.CyAction (also extends javax.swing.Action, javax.swing.event.PopupMenuListener)
- org.cytoscape.work.swing.DynamicSubmenuListener (also extends javax.swing.event.PopupMenuListener)
- javax.swing.event.PopupMenuListener
- org.cytoscape.application.swing.CyAction (also extends javax.swing.Action, javax.swing.event.MenuListener)
- org.cytoscape.work.swing.DynamicSubmenuListener (also extends javax.swing.event.MenuListener)
- java.awt.event.ActionListener
- org.cytoscape.util.swing.FileUtil
- org.cytoscape.equations.Function
- org.cytoscape.util.swing.GravityTracker
- org.cytoscape.view.presentation.property.values.Handle
- org.cytoscape.view.presentation.property.values.HandleFactory
- org.cytoscape.task.hide.HideTaskFactory
- org.cytoscape.util.swing.IconManager
- org.cytoscape.filter.view.InteractivityChangedListener
- org.cytoscape.equations.Interpreter
- org.cytoscape.work.json.JSONResult
- org.cytoscape.view.vizmap.gui.event.LexiconStateChangedListener
- org.cytoscape.work.util.ListChangeListener<T>
- org.cytoscape.view.vizmap.gui.editor.ListEditor
- org.cytoscape.view.vizmap.gui.MappingFunctionFactoryManager
- org.cytoscape.filter.model.NamedTransformer<C,E>
- org.cytoscape.task.NetworkCollectionTaskFactory
- org.cytoscape.task.analyze.AnalyzeNetworkCollectionTaskFactory
- org.cytoscape.task.create.CreateNetworkViewTaskFactory
- org.cytoscape.task.destroy.DestroyNetworkTaskFactory
- org.cytoscape.view.presentation.NetworkImageFactory
- org.cytoscape.io.webservice.NetworkImportWebServiceClient
- org.cytoscape.task.NetworkTaskFactory
- org.cytoscape.task.create.CloneNetworkTaskFactory
- org.cytoscape.task.edit.ConnectSelectedNodesTaskFactory
- org.cytoscape.task.destroy.DeleteSelectedNodesAndEdgesTaskFactory
- org.cytoscape.task.select.DeselectAllEdgesTaskFactory
- org.cytoscape.task.select.DeselectAllNodesTaskFactory
- org.cytoscape.task.select.DeselectAllTaskFactory
- org.cytoscape.task.edit.EditNetworkTitleTaskFactory
- org.cytoscape.task.write.ExportNetworkTaskFactory
- org.cytoscape.task.select.InvertSelectedEdgesTaskFactory
- org.cytoscape.task.select.InvertSelectedNodesTaskFactory
- org.cytoscape.task.create.NewNetworkSelectedNodesAndEdgesTaskFactory
- org.cytoscape.task.create.NewNetworkSelectedNodesOnlyTaskFactory
- org.cytoscape.task.select.SelectAdjacentEdgesTaskFactory
- org.cytoscape.task.select.SelectAllEdgesTaskFactory
- org.cytoscape.task.select.SelectAllNodesTaskFactory
- org.cytoscape.task.select.SelectAllTaskFactory
- org.cytoscape.task.select.SelectConnectedNodesTaskFactory
- org.cytoscape.task.select.SelectFirstNeighborsTaskFactory
- org.cytoscape.task.select.SelectFromFileListTaskFactory
- org.cytoscape.task.NetworkViewCollectionTaskFactory
- org.cytoscape.task.visualize.ApplyPreferredLayoutTaskFactory
- org.cytoscape.task.visualize.ApplyVisualStyleTaskFactory
- org.cytoscape.task.destroy.DestroyNetworkViewTaskFactory
- org.cytoscape.task.NetworkViewLocationTaskFactory
- org.cytoscape.application.NetworkViewRenderer
- org.cytoscape.task.NetworkViewTaskFactory
- org.cytoscape.task.write.ExportNetworkImageTaskFactory
- org.cytoscape.task.write.ExportNetworkViewTaskFactory
- org.cytoscape.task.edit.GroupNodesTaskFactory
- org.cytoscape.task.hide.HideSelectedEdgesTaskFactory
- org.cytoscape.task.hide.HideSelectedNodesTaskFactory
- org.cytoscape.task.hide.HideSelectedTaskFactory
- org.cytoscape.task.hide.HideUnselectedEdgesTaskFactory
- org.cytoscape.task.hide.HideUnselectedNodesTaskFactory
- org.cytoscape.task.hide.HideUnselectedTaskFactory
- org.cytoscape.task.edit.UnGroupTaskFactory
- org.cytoscape.task.hide.UnHideAllEdgesTaskFactory
- org.cytoscape.task.hide.UnHideAllNodesTaskFactory
- org.cytoscape.task.hide.UnHideAllTaskFactory
- org.cytoscape.task.hide.UnHideSelectedEdgesTaskFactory
- org.cytoscape.task.hide.UnHideSelectedNodesTaskFactory
- org.cytoscape.task.create.NewEmptyNetworkViewFactory
- org.cytoscape.task.NodeViewTaskFactory
- org.cytoscape.task.edit.CollapseGroupTaskFactory
- org.cytoscape.task.edit.ExpandGroupTaskFactory
- org.cytoscape.task.select.SelectFirstNeighborsNodeViewTaskFactory
- org.cytoscape.task.edit.UnGroupNodesTaskFactory
- org.cytoscape.view.model.NullDataType
- org.cytoscape.util.swing.OpenBrowser
- org.cytoscape.util.color.Palette
- org.cytoscape.util.color.PaletteProvider
- org.cytoscape.util.color.PaletteProviderManager
- org.cytoscape.util.color.PaletteType
- org.cytoscape.view.model.Range<T>
- org.cytoscape.io.util.RecentlyOpenedTracker
- org.cytoscape.view.presentation.events.RenderingEngineAboutToBeRemovedListener
- org.cytoscape.view.presentation.RenderingEngineFactory<T>
- org.cytoscape.view.presentation.RenderingEngineManager
- org.cytoscape.work.swing.RequestsUIHelper
- org.cytoscape.task.RootNetworkCollectionTaskFactory
- org.cytoscape.task.RowTaskFactory
- org.cytoscape.io.webservice.events.SearchFinishedListener
- org.cytoscape.io.webservice.SearchWebServiceClient
- org.cytoscape.work.ServiceProperties
- org.cytoscape.view.model.SnapshotEdgeInfo
- org.cytoscape.view.model.SnapshotNodeInfo
- org.cytoscape.view.model.spacial.SpacialIndex2D<K>
- org.cytoscape.view.model.spacial.NetworkSpacialIndex2D
- org.cytoscape.view.model.spacial.SpacialIndex2DEnumerator<K>
- org.cytoscape.view.model.spacial.NodeSpacialIndex2DEnumerator
- org.cytoscape.work.swing.StatusBarPanelFactory
- org.cytoscape.io.util.StreamUtil
- org.cytoscape.command.StringToModel
- org.cytoscape.task.TableCellTaskFactory
- org.cytoscape.task.TableColumnTaskFactory
- org.cytoscape.task.destroy.DeleteColumnTaskFactory
- org.cytoscape.task.edit.RenameColumnTaskFactory
- org.cytoscape.io.webservice.TableImportWebServiceClient
- org.cytoscape.task.TableTaskFactory
- org.cytoscape.task.destroy.DeleteTableTaskFactory
- org.cytoscape.task.write.ExportTableTaskFactory
- org.cytoscape.task.edit.ImportDataTableTaskFactory
- org.cytoscape.task.edit.JoinTablesTaskTaskFactory
- org.cytoscape.task.edit.MapGlobalToLocalTableTaskFactory
- org.cytoscape.task.edit.MapTableToNetworkTablesTaskFactory
- org.cytoscape.application.TableViewRenderer
- org.cytoscape.view.vizmap.TableVisualMappingManager
- org.cytoscape.work.Task
- org.cytoscape.io.read.CyNetworkReader
- org.cytoscape.io.read.CyPropertyReader
- org.cytoscape.io.read.CySessionReader
- org.cytoscape.io.read.CyTableReader
- org.cytoscape.io.write.CyWriter
- org.cytoscape.work.ObservableTask
- org.cytoscape.io.read.VizmapReader
- org.cytoscape.work.TaskFactory
- org.cytoscape.task.write.ExportSelectedNetworkTaskFactory
- org.cytoscape.task.write.ExportSelectedTableTaskFactory
- org.cytoscape.task.write.ExportVizmapTaskFactory
- org.cytoscape.task.read.LoadMultipleNetworkFilesTaskFactory
- org.cytoscape.task.read.LoadNetworkFileTaskFactory
- org.cytoscape.task.read.LoadNetworkURLTaskFactory
- org.cytoscape.task.read.LoadTableFileTaskFactory
- org.cytoscape.task.read.LoadTableURLTaskFactory
- org.cytoscape.task.read.LoadVizmapFileTaskFactory
- org.cytoscape.task.edit.MergeTablesTaskFactory
- org.cytoscape.application.swing.search.NetworkSearchTaskFactory
- org.cytoscape.task.create.NewSessionTaskFactory
- org.cytoscape.task.read.OpenSessionTaskFactory
- org.cytoscape.task.write.SaveSessionAsTaskFactory
- org.cytoscape.task.write.SaveSessionTaskFactory
- org.cytoscape.work.TaskManager<T,C>
- org.cytoscape.work.swing.DialogTaskManager
- org.cytoscape.work.swing.PanelTaskManager
- org.cytoscape.work.SynchronousTaskManager<T>
- org.cytoscape.work.TaskMonitor
- org.cytoscape.work.TaskObserver
- org.cytoscape.work.swing.TaskStatusPanelFactory
- org.cytoscape.work.Togglable
- org.cytoscape.application.swing.ToolBarComponent
- org.cytoscape.application.swing.TableToolBarComponent
- org.cytoscape.filter.model.Transformer<C,E>
- org.cytoscape.filter.model.ElementTransformer<C,E>
- org.cytoscape.filter.model.Filter<C,E>
- org.cytoscape.filter.model.CompositeFilter<C,E>
- org.cytoscape.filter.model.HolisticTransformer<C,E>
- org.cytoscape.filter.model.SubFilterTransformer<C,E>
- org.cytoscape.filter.model.ValidatableTransformer<C,E>
- org.cytoscape.filter.TransformerContainer<C,E>
- org.cytoscape.filter.model.TransformerFactory<C,E>
- org.cytoscape.filter.model.ElementTransformerFactory<C,E>
- org.cytoscape.filter.model.FilterFactory<C,E>
- org.cytoscape.filter.model.HolisticTransformerFactory<C,E>
- org.cytoscape.filter.model.TransformerListener
- org.cytoscape.filter.TransformerManager
- org.cytoscape.filter.transformers.Transformers
- org.cytoscape.filter.model.TransformerSink<T>
- org.cytoscape.filter.model.TransformerSource<C,E>
- org.cytoscape.filter.view.TransformerViewFactory
- javax.swing.tree.TreeModel
- org.cytoscape.util.swing.TreeTableModel
- org.cytoscape.equations.TreeNode
- org.cytoscape.work.TunableHandler
- org.cytoscape.work.swing.GUITunableHandler
- org.cytoscape.command.StringTunableHandler
- org.cytoscape.work.properties.TunablePropertyHandler
- org.cytoscape.work.TunableHandlerFactory<T>
- org.cytoscape.work.swing.GUITunableHandlerFactory<T>
- org.cytoscape.command.StringTunableHandlerFactory<T>
- org.cytoscape.work.properties.TunablePropertyHandlerFactory<T>
- org.cytoscape.work.TunableMutator<T,S>
- org.cytoscape.work.properties.TunablePropertySerializer
- org.cytoscape.work.properties.TunablePropertySerializerFactory
- org.cytoscape.work.TunableRecorder<T>
- org.cytoscape.work.TunableSetter
- org.cytoscape.work.swing.TunableUIHelper
- org.cytoscape.work.TunableValidator
- org.cytoscape.work.undo.UndoSupport
- org.cytoscape.work.swing.undo.SwingUndoSupport
- org.cytoscape.task.hide.UnHideTaskFactory
- org.cytoscape.view.vizmap.gui.editor.ValueEditor<V>
- org.cytoscape.view.vizmap.mappings.ValueTranslator<V,T>
- org.cytoscape.model.VirtualColumnInfo
- org.cytoscape.view.model.Visualizable
- org.cytoscape.view.model.VisualLexicon
- org.cytoscape.view.vizmap.VisualMappingFunction<K,V>
- org.cytoscape.view.vizmap.mappings.ContinuousMapping<K,V>
- org.cytoscape.view.vizmap.mappings.DiscreteMapping<K,V>
- org.cytoscape.view.vizmap.mappings.PassthroughMapping<K,V>
- org.cytoscape.view.vizmap.VisualMappingFunctionFactory
- org.cytoscape.view.vizmap.VisualMappingManager
- org.cytoscape.view.model.VisualProperty<T>
- org.cytoscape.view.vizmap.VisualPropertyDependencyFactory<T>
- org.cytoscape.view.vizmap.gui.editor.VisualPropertyEditor<T>
- org.cytoscape.view.vizmap.gui.editor.VisualPropertyEditor2<T>
- org.cytoscape.view.presentation.property.values.VisualPropertyValue
- org.cytoscape.view.presentation.property.values.ArrowShape
- org.cytoscape.view.presentation.customgraphics.CyCustomGraphics2<T> (also extends org.cytoscape.view.presentation.customgraphics.CyCustomGraphics<T>)
- org.cytoscape.view.presentation.property.values.EdgeStacking
- org.cytoscape.view.presentation.property.values.LineType
- org.cytoscape.view.presentation.property.values.MappableVisualPropertyValue
- org.cytoscape.view.presentation.property.values.NodeShape
- org.cytoscape.view.presentation.property.table.TableMode
- org.cytoscape.view.vizmap.gui.editor.VisualPropertyValueEditor<V>
- org.cytoscape.view.vizmap.VisualStyle
- org.cytoscape.view.vizmap.VisualStyleFactory
- org.cytoscape.view.vizmap.gui.event.VizMapEventHandler
- org.cytoscape.view.vizmap.gui.event.VizMapEventHandlerManager
- org.cytoscape.view.vizmap.gui.VizMapGUI
- org.cytoscape.io.read.VizmapReaderManager
- org.cytoscape.io.webservice.WebServiceClient
- org.cytoscape.io.webservice.swing.WebServiceGUI
- org.cytoscape.io.webservice.swing.WebServiceGUIClient
Annotation Interface Hierarchy
- org.cytoscape.work.ContainsTunables (implements java.lang.annotation.Annotation)
- org.cytoscape.work.ProvidesTitle (implements java.lang.annotation.Annotation)
- org.cytoscape.work.Tunable (implements java.lang.annotation.Annotation)
Enum Class Hierarchy
- java.lang.Object
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)
- org.cytoscape.equations.ArgType
- org.cytoscape.view.presentation.annotations.ArrowAnnotation.AnchorType
- org.cytoscape.view.presentation.annotations.ArrowAnnotation.ArrowEnd
- org.cytoscape.group.data.AttributeHandlingType
- org.cytoscape.util.color.BrewerType (implements org.cytoscape.util.color.PaletteType)
- org.cytoscape.filter.model.CompositeFilter.Type
- org.cytoscape.view.vizmap.gui.editor.ContinuousEditorType
- org.cytoscape.model.CyEdge.Type
- org.cytoscape.group.CyGroupSettingsManager.DoubleClickAction
- org.cytoscape.group.CyGroupSettingsManager.GroupViewType
- org.cytoscape.jobs.CyJobStatus.Status
- org.cytoscape.application.swing.CyNetworkViewDesktopMgr.ArrangeType
- org.cytoscape.property.CyProperty.SavePolicy
- org.cytoscape.model.CyTable.Mutability
- org.cytoscape.model.CyTableFactory.InitialTableSize
- org.cytoscape.application.swing.CytoPanelName
- org.cytoscape.application.swing.CytoPanelState
- org.cytoscape.io.DataCategory
- org.cytoscape.work.FinishStatus.Type
- org.cytoscape.view.presentation.property.values.Justification
- org.cytoscape.view.presentation.property.values.Position
- org.cytoscape.filter.predicates.Predicate
- org.cytoscape.model.SavePolicy
- org.cytoscape.view.presentation.annotations.ShapeAnnotation.ShapeType
- org.cytoscape.work.TaskMonitor.Level
- org.cytoscape.equations.Token.Type
- org.cytoscape.work.TunableValidator.ValidationState
- org.cytoscape.view.layout.WeightTypes
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)